[Incf-ocns-software-wg] INCF/OCNS Software Working Group sessions: Pierre Yger: SpikeInterface: 14 May 1500 UTC

[Ankur Sinha]

Dear all,

A reminder of today's session and meeting. We hope to see you there.

On Thu, May 09, 2024 16:39:07 GMT, Ankur Sinha wrote:
> Dear all,
> 
> Apologies for the cross posts.
> 
> Pierre Yger will present SpikeInterface at the next open INCF/OCNS
> Software Working Group (WG) session on May 14 at 1500 UTC. There will be
> a Q&A session after the presentation, followed by WG business.
> 
> Please find the abstract and joining information below:
> 
> - When: May 14, 1500 UTC
> - Where: Zoom (https://ucl.zoom.us/j/91017703246?pwd=RmdwMW9xL0FFaFVVL0Z6dUtnbkplZz09)
> - Web page: https://ocns.github.io/SoftwareWG/2024/05/07/wg-meeting-14-may-2024-spikeinterface-pierre-yger-.html
> 
> Abstract:
> 
> - https://elifesciences.org/articles/61834
> - https://spikeinterface.readthedocs.io/en/latest/
> 
> Much development has been directed toward improving the performance and
> automation of spike sorting. This continuous development, while
> essential, has contributed to an over-saturation of new, incompatible
> tools that hinders rigorous benchmarking and complicates reproducible
> analysis. To address these limitations, we developed SpikeInterface, a
> Python framework designed to unify preexisting spike sorting
> technologies into a single codebase and to facilitate straightforward
> comparison and adoption of different approaches. With a few lines of
> code, researchers can reproducibly run, compare, and benchmark most
> modern spike sorting algorithms; pre-process, post-process, and
> visualize extracellular datasets; validate, curate, and export sorting
> outputs; and more. In this paper, we provide an overview of
> SpikeInterface and, with applications to real and simulated datasets,
> demonstrate how it can be utilized to reduce the burden of manual
> curation and to more comprehensively benchmark automated spike sorters.
> 
> 
> 
> -- 
> Thanks,
> Regards,
> Ankur Sinha (He / Him / His) | https://ankursinha.in
> Research Fellow at the Silver Lab, University College London | http://silverlab.org/
> Free/Open source community volunteer at the NeuroFedora project | https://neuro.fedoraproject.org
> Time zone: Europe/London

-- 
Thanks,
Regards,
Ankur Sinha (He / Him / His) | https://ankursinha.in
Time zone: Europe/London